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开发与工程 · SKILL.md

hpc-gaussian

hpc-gaussian

【开发与工程】Build, review, debug, and automate Gaussian quantum chemistry workflows. Use when working with Gaussian input files, Link 0 directives, route sections, charge and multiplicity, basis sets, SCF or optimization or frequency jobs, checkpoint handoff, or Gaussian execution and restart issues.

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GitHub

name: hpc-gaussian description: Build, review, debug, and automate Gaussian quantum chemistry workflows. Use when working with Gaussian input files, Link 0 directives, route sections, charge and multiplicity, basis sets, SCF or optimization or frequency jobs, checkpoint handoff, or Gaussian execution and restart issues.

HPC Gaussian

Treat Gaussian as a staged quantum-chemistry workflow built around a valid input deck and explicit checkpoint policy.

Start

  1. Read references/workflow-manual.md before creating or editing a Gaussian input file.
  2. Read references/input-and-link0-matrix.md when mapping Link 0 directives, route keywords, title, charge, multiplicity, and geometry blocks.
  3. Read references/geometry-charge-spin.md when the structure, charge, multiplicity, or fragment logic is uncertain.
  4. Read references/method-basis-and-jobtype.md when choosing the method, basis set, and job type.
  5. Read references/scf-opt-freq-and-solvation.md when choosing SCF, optimization, frequency, or solvent settings.
  6. Read references/checkpoint-restart-and-artifacts.md when designing checkpoint, restart, formatted-checkpoint, or cube workflows.
  7. Read references/cluster-execution-playbook.md when staging a Gaussian workflow for scheduler-backed cluster execution.
  8. Read references/error-recovery.md when parsing, SCF, optimization, frequency, or restart behavior fails.

Additional References

Load these on demand:

  • references/error-pattern-dictionary.md for structured SCF, geometry, and restart failure signatures

Reusable Templates

Use assets/templates/ when a concrete starting input is needed, especially:

  • sp_water.gjf
  • opt_freq_water.gjf
  • gaussian-g16-slurm.sh

Guardrails

  • Do not invent Gaussian keywords or Link 0 directives.
  • Do not treat charge and multiplicity as cosmetic metadata.
  • Do not run restart-sensitive workflows without an explicit checkpoint policy.
  • Do not copy route sections from unrelated systems without checking method, basis, and job intent.

Outputs

Summarize:

  • job type
  • method and basis selection
  • charge and multiplicity
  • checkpoint or restart policy
  • expected key outputs and next stage
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