Data & research · SKILL.md

geo-database

geo-database

NCBI GEO access via GEOparse and E-utilities. Search by keyword/organism/platform, download GSE series matrices, parse GPL annotations, extract GSM metadata, load expression matrices into pandas. For single-cell use cellxgene-census; for multi-DB access use gget-genomic-databases.

Independent GitHub snapshot · Automated classification · Original documentation governs

Jjaechang-hits / sciagent-skillsSource-available

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npx skills add jaechang-hits/sciagent-skills --skill geo-database

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geo-database

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