Productivity · SKILL.md

prokka-genome-annotation

prokka-genome-annotation

Annotate prokaryotic genomes (bacteria, archaea, viruses) via Prokka's BLAST/HMM pipeline. Identifies CDS, rRNA, tRNA, tmRNA, signal peptides against Pfam, TIGRFAMs, RefSeq. Outputs GFF3, GenBank, FASTA, TSV. Use PGAP for NCBI GenBank submission; Bakta for faster NCBI-compatible annotation.

Independent GitHub snapshot · Automated classification · Original documentation governs

Jjaechang-hits / sciagent-skillsSource-available

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npx skills add jaechang-hits/sciagent-skills --skill prokka-genome-annotation

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Source code

prokka-genome-annotation

Skill documentation

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