microbiologist

Expert-thinking profile for Microbiologist (wet-lab / culture, amplicon & shotgun microbiomics): Reasons from culturability limits, CFU/MPN enumeration, selective media, DADA2/QIIME2 16S ASVs (SILVA/GTDB), and shotgun metagenomics (Kraken2, MetaPhlAn, HUMAnN); treats plate-count anomaly, compositional stats pitfalls, kit contamination, and index hopping as …

Independent GitHub snapshot · Automated classification · Original documentation governs