---

name: kustomize description: Customize Kubernetes manifests without templating using Kustomize. category: devops risk: critical source: https://github.com/BagelHole/DevOps-Security-Agent-Skills source_repo: BagelHole/DevOps-Security-Agent-Skills source_type: community date_added: '2026-09-20' license: MIT license_source: https://github.com/BagelHole/DevOps-Security-Agent-Skills/blob/main/LICENSE compatibility: Requires the relevant platform CLIs (kubectl, helm, terraform, git, CI runners) and authorized access to the target environment. Docs-only; helper scripts and templates not bundled. metadata: author: devops-skills version: '1.0'

Kustomize

Customize Kubernetes resources declaratively without templating.

When to Use This Skill

Use this skill when:

• Managing Kubernetes configs across environments
• Patching existing manifests without modification
• Creating configuration variants from bases
• Customizing third-party manifests
• Preferring declarative over templating approach

Prerequisites

• kubectl 1.14+ (includes kustomize)
• Or standalone kustomize CLI
• Basic Kubernetes manifest knowledge

Directory Structure

myapp/
├── base/
│   ├── kustomization.yaml
│   ├── deployment.yaml
│   ├── service.yaml
│   └── configmap.yaml
└── overlays/
    ├── development/
    │   ├── kustomization.yaml
    │   └── replica-patch.yaml
    ├── staging/
    │   ├── kustomization.yaml
    │   └── namespace.yaml
    └── production/
        ├── kustomization.yaml
        ├── replica-patch.yaml
        └── resource-patch.yaml

Base Configuration

kustomization.yaml

# base/kustomization.yaml
apiVersion: kustomize.config.k8s.io/v1beta1
kind: Kustomization

resources:
  - deployment.yaml
  - service.yaml
  - configmap.yaml

commonLabels:
  app: myapp
  
commonAnnotations:
  managed-by: kustomize

Base Resources

# base/deployment.yaml
apiVersion: apps/v1
kind: Deployment
metadata:
  name: myapp
spec:
  replicas: 1
  selector:
    matchLabels:
      app: myapp
  template:
    metadata:
      labels:
        app: myapp
    spec:
      containers:
      - name: myapp
        image: myapp:latest
        ports:
        - containerPort: 8080
        resources:
          requests:
            memory: "64Mi"
            cpu: "100m"
          limits:
            memory: "128Mi"
            cpu: "200m"

Overlays

Development Overlay

# overlays/development/kustomization.yaml
apiVersion: kustomize.config.k8s.io/v1beta1
kind: Kustomization

resources:
  - ../../base

namespace: myapp-dev

namePrefix: dev-

commonLabels:
  environment: development

images:
  - name: myapp
    newTag: dev-latest

Production Overlay

# overlays/production/kustomization.yaml
apiVersion: kustomize.config.k8s.io/v1beta1
kind: Kustomization

resources:
  - ../../base

namespace: myapp-prod

namePrefix: prod-

commonLabels:
  environment: production

replicas:
  - name: myapp
    count: 5

images:
  - name: myapp
    newName: registry.example.com/myapp
    newTag: v2.0.0

patches:
  - path: resource-patch.yaml

Patching

Strategic Merge Patch

# overlays/production/resource-patch.yaml
apiVersion: apps/v1
kind: Deployment
metadata:
  name: myapp
spec:
  template:
    spec:
      containers:
      - name: myapp
        resources:
          requests:
            memory: "256Mi"
            cpu: "500m"
          limits:
            memory: "512Mi"
            cpu: "1000m"

JSON Patch

# kustomization.yaml
patches:
  - target:
      kind: Deployment
      name: myapp
    patch: |-
      - op: replace
        path: /spec/replicas
        value: 5
      - op: add
        path: /spec/template/spec/containers/0/env
        value:
          - name: LOG_LEVEL
            value: info

Inline Patches

# kustomization.yaml
patches:
  - patch: |-
      apiVersion: apps/v1
      kind: Deployment
      metadata:
        name: myapp
      spec:
        replicas: 3
    target:
      kind: Deployment
      name: myapp

Configuration Generation

ConfigMap Generator

# kustomization.yaml
configMapGenerator:
  - name: myapp-config
    literals:
      - APP_ENV=production
      - LOG_LEVEL=info
    files:
      - config.yaml
    envs:
      - config.env
    options:
      disableNameSuffixHash: false

Secret Generator

# kustomization.yaml
secretGenerator:
  - name: myapp-secrets
    literals:
      - api-key=secret123
    files:
      - tls.crt
      - tls.key
    type: kubernetes.io/tls

Image Transformations

# kustomization.yaml
images:
  # Change tag
  - name: myapp
    newTag: v2.0.0
  
  # Change registry
  - name: myapp
    newName: registry.example.com/myapp
    newTag: v2.0.0
  
  # Use digest
  - name: myapp
    digest: sha256:abc123...

Resource Transformations

Name Prefix/Suffix

# kustomization.yaml
namePrefix: prod-
nameSuffix: -v2

Namespace

# kustomization.yaml
namespace: production

Labels and Annotations

# kustomization.yaml
commonLabels:
  app.kubernetes.io/name: myapp
  app.kubernetes.io/environment: production

commonAnnotations:
  example.com/owner: team-a

Replicas

# kustomization.yaml
replicas:
  - name: myapp
    count: 5
  - name: worker
    count: 3

Components

# components/monitoring/kustomization.yaml
apiVersion: kustomize.config.k8s.io/v1alpha1
kind: Component

resources:
  - servicemonitor.yaml

patches:
  - patch: |-
      apiVersion: apps/v1
      kind: Deployment
      metadata:
        name: myapp
      spec:
        template:
          metadata:
            annotations:
              prometheus.io/scrape: "true"
              prometheus.io/port: "8080"

# overlays/production/kustomization.yaml
components:
  - ../../components/monitoring

Remote Resources

# kustomization.yaml
resources:
  # Remote Git repository
  - https://github.com/org/manifests//base?ref=v1.0.0
  
  # Remote URL
  - https://raw.githubusercontent.com/org/repo/main/deployment.yaml

Commands

# Build and view output
kubectl kustomize overlays/production

# Apply to cluster
kubectl apply -k overlays/production

# Delete resources
kubectl delete -k overlays/production

# View diff
kubectl diff -k overlays/production

# Build with standalone kustomize
kustomize build overlays/production

# Build and apply
kustomize build overlays/production | kubectl apply -f -

Helm Chart Integration

# kustomization.yaml
helmCharts:
  - name: prometheus
    repo: https://prometheus-community.github.io/helm-charts
    version: 25.0.0
    releaseName: prometheus
    namespace: monitoring
    valuesFile: values.yaml
    includeCRDs: true

Variable Substitution

# kustomization.yaml
apiVersion: kustomize.config.k8s.io/v1beta1
kind: Kustomization

resources:
  - deployment.yaml

replacements:
  - source:
      kind: ConfigMap
      name: myapp-config
      fieldPath: data.APP_VERSION
    targets:
      - select:
          kind: Deployment
          name: myapp
        fieldPaths:
          - spec.template.spec.containers.[name=myapp].image
        options:
          delimiter: ':'
          index: 1

Common Issues

Issue: Name Hash Conflicts

Problem: Resources not updating when ConfigMap changes Solution: Enable name suffix hash (default) or use replacement

Issue: Patch Not Applying

Problem: Strategic merge patch doesn't work Solution: Verify resource names match, use JSON patch for complex changes

Issue: Remote Resource Fails

Problem: Cannot fetch remote resources Solution: Check URL, verify ref/tag exists, ensure network access

Issue: Label Selector Mismatch

Problem: commonLabels breaks selectors Solution: Use includeSelectors: false or exclude specific resources

commonLabels:
  app: myapp
configurations:
  - labelExclusions.yaml

Best Practices

• Keep base manifests environment-agnostic
• Use overlays for environment-specific config
• Prefer strategic merge patches for simple changes
• Use components for optional features
• Pin remote resource versions
• Enable ConfigMap/Secret hash suffixes
• Document overlay structure in README
• Test builds before applying

Related Skills

• kubernetes-ops (kubernetes-ops) - K8s fundamentals
• helm-charts (helm-charts) - Helm alternative
• argocd-gitops (argocd-gitops) - GitOps deployment

Limitations

• Guidance executes against real environments: confirm target, blast radius, and rollback plan before applying anything.
• Never deploy to production without explicit approval. Docs-only import: upstream scripts and templates not bundled.

Example

git status && git diff --stat
kubectl diff -f manifest.yaml

Adapted from BagelHole/DevOps-Security-Agent-Skills (MIT); frontmatter, When to Use/Limitations, and safety boundaries added for upstream compliance. Docs-only import: helper scripts and templates not bundled.