writing-skills
writing-skills
Use when creating new skills, editing existing skills, or verifying skills work before deployment
deploy-shinyproxyDeploy ShinyProxy for hosting multiple containerized Shiny applications. Covers ShinyProxy Docker deployment, application.yml configuration, Shiny app Docker images, authentication, container backends, usage tracking, and scaling. Use when hosting multiple Shiny apps behind a single entry point, needing per-app authentication and access control, deploying S…
Independent GitHub snapshot · Automated classification · Original documentation governs
部 ShinyProxy 以宿多容器化之 Shiny 應用,具認證與用量跟蹤。
各 Shiny 應用需其自鏡像。Shiny 應用之 Dockerfile 例:
FROM rocker/shiny:4.5.0
RUN apt-get update && apt-get install -y \
libcurl4-openssl-dev \
libssl-dev \
&& rm -rf /var/lib/apt/lists/*
RUN R -e "install.packages(c('shiny', 'bslib', 'DT', 'dplyr'), \
repos='https://cloud.r-project.org/')"
COPY app/ /srv/shiny-server/app/
RUN chown -R shiny:shiny /srv/shiny-server/app
USER shiny
EXPOSE 3838
CMD ["R", "-e", "shiny::runApp('/srv/shiny-server/app', host='0.0.0.0', port=3838)"]
建並測各應用:
docker build -t myorg/dashboard:latest ./apps/dashboard/
docker run --rm -p 3838:3838 myorg/dashboard:latest
得: 各 Shiny 應用於其自容器獨立行。
application.yml:
proxy:
title: "Shiny Applications"
port: 8080
container-backend: docker
docker:
internal-networking: true
authentication: simple
admin-groups: admins
users:
- name: admin
password: admin_password
groups: admins
- name: analyst
password: analyst_password
groups: users
specs:
- id: dashboard
display-name: "Analytics Dashboard"
description: "Interactive data analysis dashboard"
container-image: myorg/dashboard:latest
container-cmd: ["R", "-e", "shiny::runApp('/srv/shiny-server/app', host='0.0.0.0', port=3838)"]
container-network: shinyproxy-net
port: 3838
access-groups: [admins, users]
- id: report-builder
display-name: "Report Builder"
description: "Generate custom reports"
container-image: myorg/report-builder:latest
container-cmd: ["R", "-e", "shiny::runApp('/srv/shiny-server/app', host='0.0.0.0', port=3838)"]
container-network: shinyproxy-net
port: 3838
access-groups: [admins]
logging:
file:
name: /opt/shinyproxy/log/shinyproxy.log
server:
forward-headers-strategy: native
docker-compose.yml:
services:
shinyproxy:
image: openanalytics/shinyproxy:3.1.1
container_name: shinyproxy
ports:
- "8080:8080"
volumes:
- ./application.yml:/opt/shinyproxy/application.yml:ro
- /var/run/docker.sock:/var/run/docker.sock
- shinyproxy-logs:/opt/shinyproxy/log
networks:
- shinyproxy-net
restart: unless-stopped
networks:
shinyproxy-net:
name: shinyproxy-net
driver: bridge
volumes:
shinyproxy-logs:
# Create the network first (ShinyProxy spawns containers on this network)
docker network create shinyproxy-net
# Start ShinyProxy
docker compose up -d
# Check logs
docker compose logs -f shinyproxy
得: ShinyProxy 於 8080 端啟,示登錄頁,列所配之應用。
敗則: 察 docker compose logs shinyproxy。驗應用鏡像本地可得(docker images)。
如第二步示之 authentication: simple 與行內用者。
proxy:
authentication: ldap
ldap:
url: ldap://ldap.example.com:389/dc=example,dc=com
manager-dn: cn=admin,dc=example,dc=com
manager-password: ldap_admin_password
user-search-base: ou=users
user-search-filter: (uid={0})
group-search-base: ou=groups
group-search-filter: (member={0})
proxy:
authentication: openid
openid:
auth-url: https://auth.example.com/realms/myrealm/protocol/openid-connect/auth
token-url: https://auth.example.com/realms/myrealm/protocol/openid-connect/token
jwks-url: https://auth.example.com/realms/myrealm/protocol/openid-connect/certs
client-id: shinyproxy
client-secret: your_client_secret
roles-claim: realm_access.roles
於產,宜置 Nginx 於 ShinyProxy 前:
map $http_upgrade $connection_upgrade {
default upgrade;
'' close;
}
server {
listen 443 ssl;
server_name shiny.example.com;
ssl_certificate /etc/letsencrypt/live/shiny.example.com/fullchain.pem;
ssl_certificate_key /etc/letsencrypt/live/shiny.example.com/privkey.pem;
location / {
proxy_pass http://shinyproxy:8080;
proxy_http_version 1.1;
proxy_set_header Upgrade $http_upgrade;
proxy_set_header Connection $connection_upgrade;
proxy_set_header Host $host;
proxy_set_header X-Real-IP $remote_addr;
proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
proxy_set_header X-Forwarded-Proto $scheme;
proxy_read_timeout 600s;
proxy_buffering off;
}
}
WebSocket 支持至要——ShinyProxy 與 Shiny 重用 WebSocket。
ShinyProxy 將用量事件記入日誌。欲結構化跟蹤,配 InfluxDB:
proxy:
usage-stats-url: http://influxdb:8086/write?db=shinyproxy
usage-stats-username: shinyproxy
usage-stats-password: stats_password
於 compose 棧加 InfluxDB:
services:
influxdb:
image: influxdb:1.8
environment:
INFLUXDB_DB: shinyproxy
INFLUXDB_ADMIN_USER: admin
INFLUXDB_ADMIN_PASSWORD: admin_password
volumes:
- influxdata:/var/lib/influxdb
networks:
- shinyproxy-net
volumes:
influxdata:
specs:
- id: dashboard
container-image: myorg/dashboard:latest
container-memory-limit: 1g
container-cpu-limit: 1.0
max-instances: 5
container-env:
R_MAX_MEM_SIZE: 768m
# Check ShinyProxy health
curl -s http://localhost:8080/actuator/health
# Test login
curl -s -c cookies.txt -d "username=admin&password=admin_password" \
http://localhost:8080/login
# List apps via API
curl -s -b cookies.txt http://localhost:8080/api/proxyspec
得: 健端返 UP。登錄成。應用於獨容器啟。
docker 組之用者行,或掛 socket。container-network 宜合)。docker ps 察且清之。container-memory-limit 以防一應用餓他者。deploy-shiny-app - 單應用部至 shinyapps.io、Posit Connect 或 Dockerconfigure-reverse-proxy - 反向代理模式含 WebSocket 代理create-dockerfile - 通用應用鏡像 Dockerfile 建create-r-dockerfile - 用 rocker 鏡之 R 特定 Dockerfile