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training-utilities

training-utilities

Assemble safe Segmentation Models training, evaluation, fine-tuning, preprocessing, mask-shape, non-RGB, and tiny smoke-test workflows.

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name: training-utilities description: "Assemble safe Segmentation Models training, evaluation, fine-tuning, preprocessing, mask-shape, non-RGB, and tiny smoke-test workflows." disable-model-invocation: true metadata: disco-role: operating license: MIT

Segmentation Models Training Utilities

Use this sub-skill when a task asks how to train, evaluate, fine-tune, smoke-test, or troubleshoot Keras/TensorFlow Keras workflows built with Segmentation Models (segmentation_models). The focus is the safe operating loop around an already chosen model architecture/backbone: data/mask conventions, preprocessing, compile/fit/evaluate/predict, encoder freeze/unfreeze, regularization, and tiny synthetic checks.

Read when

  • Assembling a Segmentation Models training pipeline with sm.get_preprocessing(BACKBONE), sm.Unet, sm.Linknet, sm.FPN, or sm.PSPNet.
  • Deciding classes and output activation from binary, mutually exclusive multiclass, or overlapping multilabel masks.
  • Adapting non-RGB images to Segmentation Models.
  • Freezing a pretrained encoder, unfreezing for fine-tuning, or adding regularization to an existing Keras model.
  • Running a no-network, no-dataset smoke test before committing to real training.

Route elsewhere

  • Constructor signatures, architecture defaults, backbone catalogs, and PSPNet/FPN shape rules belong to the sibling model-construction sub-skill.
  • Loss/metric formulas, class weighting math, threshold behavior, and detailed loss object selection belong to the sibling losses-metrics sub-skill.
  • Package-level installation/import problems belong first to the root skill troubleshooting reference; this sub-skill covers workflow-level symptoms after import.

Fast operating procedure

  1. Set the framework before importing Segmentation Models in modern environments:

    import os
    os.environ.setdefault("SM_FRAMEWORK", "tf.keras")
    import segmentation_models as sm
    from tensorflow import keras
    
  2. Choose a BACKBONE and create preprocess_input = sm.get_preprocessing(BACKBONE).

  3. Prepare images as batches shaped (N, H, W, C) and masks as (N, H, W, classes). Apply backbone preprocessing to images only, never to mask channels.

  4. Choose classes and final activation:

    • one foreground class: classes=1, activation="sigmoid";
    • mutually exclusive foreground classes plus background: classes=len(CLASSES)+1, activation="softmax";
    • overlapping multilabel targets: classes=len(LABELS), activation="sigmoid".
  5. Build, compile, fit, evaluate, and predict with ordinary Keras APIs. Modern Keras accepts arrays, keras.utils.Sequence, and Python generators through model.fit(...); use fit_generator only for legacy code you are maintaining.

  6. For fine-tuning, pass encoder_freeze=True at construction, train the decoder briefly, then call sm.utils.set_trainable(model, recompile=False) and explicitly recompile with a suitably small learning rate. Use recompile=True only in legacy Keras environments where the model still exposes the compile attributes that Segmentation Models expects.

  7. If the user needs confidence that the runtime can train at all, run the bundled smoke script with synthetic arrays:

    python scripts/tiny_training_smoke.py --mode binary --epochs 1 --run-predict
    

Bundled references

  • references/training-workflows.md — compile/fit/evaluate/predict and fine-tuning recipes.
  • references/data-and-masks.md — image/mask shapes, class-channel choices, preprocessing, and non-RGB strategies.
  • references/troubleshooting.md — common workflow failures and fixes.

Bundled script

  • scripts/tiny_training_smoke.py — safe synthetic Unet training/evaluation/prediction smoke for binary, multiclass, and non-rgb modes. It uses encoder_weights=None and does not download data or pretrained weights.
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